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Molecular dynamics of ribosomal elongation factors G and Tu
(Springer Nature, 2011)
Translation on the ribosome is controlled by external factors. During polypeptide lengthening, elongation factors EF-Tu and EF-G consecutively interact with the bacterial ribosome. EF-Tu binds and delivers an aminoacyl-tRNA ...
Application of Topic Models to Judgments from Public Procurement Domain
(IOSPress, 2014-12)
In this work, automatic analysis of themes contained in a large corpora of judgments from public procurement domain is performed. The employed technique is unsupervised latent Dirichlet allocation (LDA). In addition, it ...
Po czym rozpoznać dobre repozytorium?
(Uniwersytet Pedagogiczny w Krakowie, 2014)
Starannie prowadzone repozytorium to repozytorium dopasowane do całego systemu repozytoryjnego, obejmującego repozytoria instytucjonalne i dziedzinowe oraz repozytoria danych. Wymiana metadanych umożliwia powstawanie ...
Diffusion in crowded biological environments: applications of Brownian dynamics
(BioMed Central, 2011-03-02)
Biochemical reactions in living systems occur in complex, heterogeneous media with total concentrations of macromolecules in the range of 50 - 400 mg/ml. Molecular species occupy a significant fraction of the immersing ...
Towards robust tags for scientific publications from natural language processing tools and Wikipedia
(Springer, 2015)
In this work, two simple methods of tagging
scientific publications with labels reflecting their content
are presented and compared. As a first source of labels,
Wikipedia is employed. A second label set is constructed
from ...
Understanding the Origins of Bacterial Resistance to Aminoglycosides through Molecular Dynamics Mutational Study of the Ribosomal A-Site
(PLOS, 2011-08-16)
In hospitals throughout the world, aminoglycosidic antibiotics are used to combat even the most severe bacterial infections. However, the continuous emergence of resistant bacteria has created an urgent need to improve ...
Towards a flexible author name disambiguation framework
(Masaryk University Press, 2011-06-27)
In this paper we propose a flexible, modular framework for author name disambiguation. Our solution consists of the core which orchestrates the disambiguation process, and replaceable modules performing concrete tasks. The ...
Workflow of metadata extraction from retro-born-digital documents
(2011-06-27)
In this work-in-progress report we propose a workflow for metadata extraction from articles in a digital form. We decompose the problem into clearly defined sub-tasks and outline possible implementations of the sub-tasks. ...